This course focuses on the concepts and tools behind reporting modern data analyses in a reproducible manner. Reproducible research is the idea that data analyses, and more generally, scientific claims, are published with their data and software code so that others may verify the findings and build upon them. The need for reproducibility is increasing dramatically as data analyses become more complex, involving larger datasets and more sophisticated computations. Reproducibility allows for people to focus on the actual content of a data analysis, rather than on superficial details reported in a written summary. In addition, reproducibility makes an analysis more useful to others because the data and code that actually conducted the analysis are available. This course will focus on literate statistical analysis tools which allow one to publish data analyses in a single document that allows others to easily execute the same analysis to obtain the same results.
Reproducible Research
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このコースについて
受講生の就業成果
35%
37%
13%
習得するスキル
受講生の就業成果
35%
37%
13%
100%オンライン
柔軟性のある期限
約11時間で修了
英語
シラバス - 本コースの学習内容
Week 1: Concepts, Ideas, & Structure
This week will cover the basic ideas of reproducible research since they may be unfamiliar to some of you. We also cover structuring and organizing a data analysis to help make it more reproducible. I recommend that you watch the videos in the order that they are listed on the web page, but watching the videos out of order isn't going to ruin the story.
Week 2: Markdown & knitr
This week we cover some of the core tools for developing reproducible documents. We cover the literate programming tool knitr and show how to integrate it with Markdown to publish reproducible web documents. We also introduce the first peer assessment which will require you to write up a reproducible data analysis using knitr.
Week 3: Reproducible Research Checklist & Evidence-based Data Analysis
This week covers what one could call a basic check list for ensuring that a data analysis is reproducible. While it's not absolutely sufficient to follow the check list, it provides a necessary minimum standard that would be applicable to almost any area of analysis.
Week 4: Case Studies & Commentaries
This week there are two
レビュー
4.5
REPRODUCIBLE RESEARCH からの人気レビュー
My favorite course, at least it gives me an argument why scripted statistics is awesome and can be applied to a number of data related activities. Recycling chunks of code has proven useful to me.
If you are at university (PhD student, academic, researcher, etc.) then you kind of know most of the "theory". However, practising R was a huge plus (personally, I liked the Week 4 task).
Of course, I liked this course. There was even an extra non-graded assignment. Plus two graded assignments. Quality instruction videos and lots of practice. Everything a learner needs.
should be included much more in course 1. it would have been great to know up front how easy it is to mix text and code, not from a reproducibility standpoint, but just to take notes.
Without taking this course wouldn't have fully understood the importance of reproducible research in data science. Thank you so much. I recommend this course for all data scientists.
Learning Knitr was cool. However, many of the slides were not directly relevant to the course. I think, more rigor can be added, or this course can be merged with one of the others.
You will learn how to use a very valuable tool in this class; its name is R Markdown. Besides Prof. Peng explains very well the importance of reproducible research. Nice course!
This course is very helpful in terms of not only doing the analysis but also getting to know the finer nuances of making a structured markdown document for future reproducible.
Very helpful and informative information on how to create reproducible research. The project gives you an opportunity to create reproducible research in the format of a report.
While I'm pretty sure this course is VERY important for researchers, it is not very useful for my area (IT) and I would like to know this before taking the course. Thank you.
I always knew documentation was important but never liked it. This course showed me just how important it was and showed me just how easy it is to do with tools like knitr.
I personally got a lot out of this, both from a philosophical perspective and a nuts-and-bolts perspective. And I got to practice a lot of stuff learned on earlier courses.
ジョンズ・ホプキンズ大学（Johns Hopkins University）について
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