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Whole genome sequencing of bacterial genomes - tools and applications に戻る

デンマーク工科大学(Technical University of Denmark(DTU)) による Whole genome sequencing of bacterial genomes - tools and applications の受講者のレビューおよびフィードバック

4.6
633件の評価
170件のレビュー

コースについて

This course will cover the topic of Whole genome sequencing (WGS) of bacterial genomes which is becoming more and more relevant for the medical sector. WGS technology and applications are high on international political agenda, as the classical methods are being replaced by WGS technology and therefore bioinformatic tools are extremely important for allowing the people working in this sector to be able to analyze the data and obtain results that can be interpreted and used for different purposes. The course will give the learners a basis to understand and be acquainted with WGS applications in surveillance of bacteria including species identification, typing and characterization of antimicrobial resistance and virulence traits as well as plasmid characterization. It will also give the opportunity to learners to learn about online tools and what they can be used for through demonstrations on how to use some of these tools and exercises to be solved by learners with use of freely available WGS analysis tools . By the end of this course you should be able to: 1. Describe the general Principles in typing of Bacteria 2. Give examples of the applications of Whole Genome Sequencing to Surveillance of bacterial pathogens and antimicrobial resistance 3. Apply genomic tools for sub-typing and surveillance 4. Define the concept of Next-Generation Sequencing and describe the sequencing data from NGS 5. Describe how to do de novo assembly from raw reads to contigs 6. Enumerate the methods behind the tools for species identification, MLST typing and resistance gene detection 7. Apply the tools for species identification, MLST typing and resistance gene detection in real cases of other bacterial and pathogen genomes. 8. Describe the methods behind the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing 9. Utilize the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing in real cases of other bacterial and pathogen genomes. 10. Explain the concept and be able to use the integrated bacterial analysis pipeline for batch analysis and typing of genomic data 11. Demonstrate how to construct phylogenetic tree based on SNPs 12. Apply the phylogenetic tool to construct phylogenetic trees and explain the relatedness of bacterial or pathogen strains 13. Describe how to create your own sequence database 14. Utilize the MyDbFinder tool to detect genetic markers of interest from whole genome sequencing...

人気のレビュー

MB

Jun 10, 2019

Excellent course with a wealth of information about tools and applications of whole genome sequencing. Presented in a very lucid and interesting manner, very crispy and simplified course.

XL

Jun 30, 2019

The course is using cutting-edge genome sequencing technology and the authentic software to showcasing the applications and tools of genome sequencing. It is a great chance to learn it.

フィルター:

Whole genome sequencing of bacterial genomes - tools and applications: 26 - 50 / 169 レビュー

by Jolanta G

Aug 28, 2017

Thank you for the excellent course. It was very interesting to try upload genome and use various tools for identification of the pathogens and resistance mechanisms.Very useful information and excellent excercises. Good luck!

by Purvi R

May 21, 2020

This was very informative and easy to understand course for beginners. Whole genome sequencing tools were explained very easily. I learned bacterial sub typing and new bioinformatics tools for bacterial gnome analysis.

by David M M

Apr 11, 2018

Learn the basics of WGS and how to use different tools for data analysis: species identification, plasmid search, resistance genes search, serotyping... All with a good structure and very well explained.

by Mirza M V B

Jun 10, 2019

Excellent course with a wealth of information about tools and applications of whole genome sequencing. Presented in a very lucid and interesting manner, very crispy and simplified course.

by Xiangyang L

Jun 30, 2019

The course is using cutting-edge genome sequencing technology and the authentic software to showcasing the applications and tools of genome sequencing. It is a great chance to learn it.

by Faizan A

Apr 03, 2020

A well structured course covering a broad range of topics, and being a part of this course was an amazing learning experience..

Thanks to DTU and Coursera family....

by Dr. B E S

Apr 24, 2020

A course which is worthy for a researcher who is involved in whole genome analysis and pathogen identification. The course gives a base to the use of cge website.

by Ana V U B

Dec 17, 2017

I loved the course. I lerned how to use different tools to understant a DNA information, with a lot of practical exercises. I can wait the course of metagenomics.

by S.Nipun

Jul 06, 2020

Very well structured and conducted .A very good course for hands on experience of bioinformatic online tools for Whole Genome sequencing of bacterial genomes.

by Valeria O M

Jun 03, 2018

Me gustaron los video que van directo al fundamento de cada herramienta, y lo mejor es que el curso también se enfoca en la aplicación de lo enseñado. Gracias

by Sanjana

Mar 31, 2020

The instructors are very efficient and helped me learn with full understanding and made me proficient to use the tools and databases.

Thank you very much ;)

by David P

Apr 21, 2020

Excellent beginner course for WGS. The topics of the course are very interesting and well curated. The speakers are fluent and clear during the lessons.

by Kulumanali G ]

Jun 20, 2020

It is a very wonderful and informative lecture & thank you so much Coursera & DTU for your amazing presentations. I am very grateful for this course.

by Nidhi p

Jun 08, 2020

This course content is very informative. It gives both theoretical as well as practical knowledge of Whole Genome Sequencing. MCQ's are well designed.

by Vanessa C d C L

Jan 14, 2018

This is a very interesting course, it's practical and simple to follow and I've learned a lot about whole genome sequencing and its techniques.

by sandeep K

May 18, 2018

The contents of the course were really very good and with loads of knowledge. Thank you very much for improving my knowledge in this area.

by D. J N

May 13, 2020

very informative, learn't new bioinformatic tools, Precise, crystal clear and fun learning sessions. Looking forward for more sessions

by Md. E k

May 28, 2020

The course provides a basic understanding and analysis of bacterial whole-genome sequencing data regarding antimicrobial resistance.

by Mahadi H

Jun 23, 2020

It was so informative and engaging course. I hope it will help me a lot as I intend to become a researcher in this field.

by Md S S

Feb 11, 2020

This is my first course and this a amazing course.I learned a lot from this course.wish you all a good luck.Thank you.

by Latifah D A

Dec 29, 2019

A good overview of the whole genome sequencing, by the end of this course you just need to learn about bioinformatics.

by Raquel B

Feb 13, 2020

Contents presented clearly, subjects deep adequated and consistent information. It was motivating and very useful!

by Sarah A

Mar 12, 2018

one of the best courses ever i learned so many things in a short period. looking forward to your next course.

Thanks

by Jack C

Feb 14, 2020

a little bit difficult. but there are many practical experience and practical question in the lecture and test

by PC

Sep 25, 2019

A short but fun course to learn about the various tools and applications available for whole genome sequencing.