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Whole genome sequencing of bacterial genomes - tools and applications に戻る

デンマーク工科大学(Technical University of Denmark(DTU)) による Whole genome sequencing of bacterial genomes - tools and applications の受講者のレビューおよびフィードバック

4.6
850件の評価
234件のレビュー

コースについて

This course will cover the topic of Whole genome sequencing (WGS) of bacterial genomes which is becoming more and more relevant for the medical sector. WGS technology and applications are high on international political agenda, as the classical methods are being replaced by WGS technology and therefore bioinformatic tools are extremely important for allowing the people working in this sector to be able to analyze the data and obtain results that can be interpreted and used for different purposes. The course will give the learners a basis to understand and be acquainted with WGS applications in surveillance of bacteria including species identification, typing and characterization of antimicrobial resistance and virulence traits as well as plasmid characterization. It will also give the opportunity to learners to learn about online tools and what they can be used for through demonstrations on how to use some of these tools and exercises to be solved by learners with use of freely available WGS analysis tools . By the end of this course you should be able to: 1. Describe the general Principles in typing of Bacteria 2. Give examples of the applications of Whole Genome Sequencing to Surveillance of bacterial pathogens and antimicrobial resistance 3. Apply genomic tools for sub-typing and surveillance 4. Define the concept of Next-Generation Sequencing and describe the sequencing data from NGS 5. Describe how to do de novo assembly from raw reads to contigs 6. Enumerate the methods behind the tools for species identification, MLST typing and resistance gene detection 7. Apply the tools for species identification, MLST typing and resistance gene detection in real cases of other bacterial and pathogen genomes. 8. Describe the methods behind the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing 9. Utilize the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing in real cases of other bacterial and pathogen genomes. 10. Explain the concept and be able to use the integrated bacterial analysis pipeline for batch analysis and typing of genomic data 11. Demonstrate how to construct phylogenetic tree based on SNPs 12. Apply the phylogenetic tool to construct phylogenetic trees and explain the relatedness of bacterial or pathogen strains 13. Describe how to create your own sequence database 14. Utilize the MyDbFinder tool to detect genetic markers of interest from whole genome sequencing...

人気のレビュー

AP
2020年7月19日

Thank you very much for this course through which i learnt basic handling of bioinformatics tools and concepts of WGS. This will help me a lot while pursuing my PhD research work in my field.

MB
2019年6月9日

Excellent course with a wealth of information about tools and applications of whole genome sequencing. Presented in a very lucid and interesting manner, very crispy and simplified course.

フィルター:

Whole genome sequencing of bacterial genomes - tools and applications: 126 - 150 / 234 レビュー

by Ahmed E A e

2018年10月31日

It isa fantastic course to spend your time

by Kris s

2017年12月8日

Genuinly seems fun.

Keep it up Team at TUD

by Valourstar M

2017年11月15日

developing skills in sequencing techniques

by Sonia R Q Q

2019年9月16日

a complete an interesting course, thanks!

by Md. A A

2020年7月26日

Its an awesome and very helpful course

by SHAKIL A

2020年8月31日

Too much tough but still too amazing!

by Sharma

2019年11月25日

Great course. Excellent for research.

by Dordia R

2020年6月26日

practical and clear. Really helpful!

by Deepak S

2020年4月2日

Excellent course, great instructors.

by Eunice O

2020年9月26日

such an excellent practical course.

by Tahir H

2019年12月23日

a good experience to get knowledge

by Jenny S

2020年6月11日

really helpful and awesome course

by Manaswini K

2020年6月9日

very useful ,thank you so much !!

by Rafael P

2018年6月3日

Great Course!, congratulations!

by Ibrahim H

2019年11月9日

This lecuers exterimly useful.

by 1806071

2019年9月8日

Very very informative course

by Mayur M

2020年6月25日

Very Clear and informative

by Bologa A M

2018年3月25日

very useful. thanks a lot.

by Moayad M A

2017年8月21日

very easy and interactive

by HARISH A 1

2020年6月18日

i had finally learned

it

by 俞骅

2018年7月5日

简单明了,适合初学者和做细菌分型溯源的生物学家

by VERRUCHI G

2020年8月15日

ONE OF THE BEST COURSE

by Hanan K M H

2020年7月4日

WONDERFUL >> THANK YOU

by Paola D S

2020年7月1日

Useful, well planned!

by Johanna M

2020年4月24日

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