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Whole genome sequencing of bacterial genomes - tools and applications に戻る

デンマーク工科大学(Technical University of Denmark(DTU)) による Whole genome sequencing of bacterial genomes - tools and applications の受講者のレビューおよびフィードバック

4.6
1,145件の評価
300件のレビュー

コースについて

This course will cover the topic of Whole genome sequencing (WGS) of bacterial genomes which is becoming more and more relevant for the medical sector. WGS technology and applications are high on international political agenda, as the classical methods are being replaced by WGS technology and therefore bioinformatic tools are extremely important for allowing the people working in this sector to be able to analyze the data and obtain results that can be interpreted and used for different purposes. The course will give the learners a basis to understand and be acquainted with WGS applications in surveillance of bacteria including species identification, typing and characterization of antimicrobial resistance and virulence traits as well as plasmid characterization. It will also give the opportunity to learners to learn about online tools and what they can be used for through demonstrations on how to use some of these tools and exercises to be solved by learners with use of freely available WGS analysis tools . By the end of this course you should be able to: 1. Describe the general Principles in typing of Bacteria 2. Give examples of the applications of Whole Genome Sequencing to Surveillance of bacterial pathogens and antimicrobial resistance 3. Apply genomic tools for sub-typing and surveillance 4. Define the concept of Next-Generation Sequencing and describe the sequencing data from NGS 5. Describe how to do de novo assembly from raw reads to contigs 6. Enumerate the methods behind the tools for species identification, MLST typing and resistance gene detection 7. Apply the tools for species identification, MLST typing and resistance gene detection in real cases of other bacterial and pathogen genomes. 8. Describe the methods behind the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing 9. Utilize the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing in real cases of other bacterial and pathogen genomes. 10. Explain the concept and be able to use the integrated bacterial analysis pipeline for batch analysis and typing of genomic data 11. Demonstrate how to construct phylogenetic tree based on SNPs 12. Apply the phylogenetic tool to construct phylogenetic trees and explain the relatedness of bacterial or pathogen strains 13. Describe how to create your own sequence database 14. Utilize the MyDbFinder tool to detect genetic markers of interest from whole genome sequencing...

人気のレビュー

AP

2020年7月19日

Thank you very much for this course through which i learnt basic handling of bioinformatics tools and concepts of WGS. This will help me a lot while pursuing my PhD research work in my field.

MB

2019年6月9日

Excellent course with a wealth of information about tools and applications of whole genome sequencing. Presented in a very lucid and interesting manner, very crispy and simplified course.

フィルター:

Whole genome sequencing of bacterial genomes - tools and applications: 126 - 150 / 304 レビュー

by Gajanan T

2020年9月25日

Thank you so much, this course is very informative and helpful in my academic carrier

by J K . S

2018年2月11日

FANTASTIC COURSE...!!!! HELPED ME TO DEVELOP INTEREST IN MOLECULAR BIOLOGY .

by Manikandan M

2017年10月16日

GOOD ONE TO GET KNOWLEDGE ABOUT WHOLE GENOME SEQUENCING AND BACTERIAL SUB TYPING

by hargun k

2020年7月30日

It was an excellent course. really enjoyed learning and improving my skill set.

by Pitithat p

2017年8月29日

Very nice comprehensive course. Looking forward to join the metagenomic course

by Raj S

2021年1月20日

It is a useful course for those with a basic knowledge of sequence analysis.

by Dr. J T

2020年8月25日

It has been a different experience. All the classes were really informative.

by Kumar V

2019年3月17日

Course contains relevant application based material. It was quite helpful.

by Heba M M

2017年10月14日

Good course, with amazing hands-on practice. Thanks it was really helpful.

by TCH

2022年6月11日

An excellent introduction to essential techniques and free, online tools.

by Dr. D N

2020年3月23日

This course is beneficial for microbial study with bioinformatics tools.

by Adithya A

2018年5月23日

EXCELLENT COURSE GOOD FOR ANY ONE WHO HAS A BASIC KNOWLEDGE ON GENETICS

by Olalekan O

2020年5月6日

It's quite an instructive, impactful and beneficial to my new course.

by Munirah F A

2020年9月1日

Good information and easy to get all the information, Thank you all

by Atif A C

2021年9月2日

It was a great course for beginers like me. Thanks a lot for this.

by Darío A G V

2021年2月4日

Very useful course, most of the classes are easily understandable.

by Jutimala P

2020年6月30日

indeed a very well explained course on bacterial genome sequencing

by Filippo S

2021年8月2日

practical, interesting, the final project/challenge was fantastic

by Neha G

2020年7月10日

Detailed course, learned to utilize various bioinformatics tools.

by Kotla S R

2022年4月27日

Very designed and useful video and nice explanation by DTU staff

by Arthur d M P

2020年6月30日

in fact it was a really hard, but i am happy that i have done it

by Dr. S K

2020年5月19日

It is really a great experience, I have learnt a lot. Thank you

by Devina B

2020年1月15日

Great it was amazingly delivered and straightforward.

Thank you

by Rama V

2021年1月13日

Extremely good course on Whole Genome Sequence Analysis Tools

by Vedant G

2020年9月4日

Excellent course and gained very useful knowledge from tutors