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Whole genome sequencing of bacterial genomes - tools and applications に戻る

デンマーク工科大学(Technical University of Denmark(DTU)) による Whole genome sequencing of bacterial genomes - tools and applications の受講者のレビューおよびフィードバック

4.6
1,178件の評価

コースについて

This course will cover the topic of Whole genome sequencing (WGS) of bacterial genomes which is becoming more and more relevant for the medical sector. WGS technology and applications are high on international political agenda, as the classical methods are being replaced by WGS technology and therefore bioinformatic tools are extremely important for allowing the people working in this sector to be able to analyze the data and obtain results that can be interpreted and used for different purposes. The course will give the learners a basis to understand and be acquainted with WGS applications in surveillance of bacteria including species identification, typing and characterization of antimicrobial resistance and virulence traits as well as plasmid characterization. It will also give the opportunity to learners to learn about online tools and what they can be used for through demonstrations on how to use some of these tools and exercises to be solved by learners with use of freely available WGS analysis tools . By the end of this course you should be able to: 1. Describe the general Principles in typing of Bacteria 2. Give examples of the applications of Whole Genome Sequencing to Surveillance of bacterial pathogens and antimicrobial resistance 3. Apply genomic tools for sub-typing and surveillance 4. Define the concept of Next-Generation Sequencing and describe the sequencing data from NGS 5. Describe how to do de novo assembly from raw reads to contigs 6. Enumerate the methods behind the tools for species identification, MLST typing and resistance gene detection 7. Apply the tools for species identification, MLST typing and resistance gene detection in real cases of other bacterial and pathogen genomes. 8. Describe the methods behind the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing 9. Utilize the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing in real cases of other bacterial and pathogen genomes. 10. Explain the concept and be able to use the integrated bacterial analysis pipeline for batch analysis and typing of genomic data 11. Demonstrate how to construct phylogenetic tree based on SNPs 12. Apply the phylogenetic tool to construct phylogenetic trees and explain the relatedness of bacterial or pathogen strains 13. Describe how to create your own sequence database 14. Utilize the MyDbFinder tool to detect genetic markers of interest from whole genome sequencing...

人気のレビュー

AP

2020年7月19日

Thank you very much for this course through which i learnt basic handling of bioinformatics tools and concepts of WGS. This will help me a lot while pursuing my PhD research work in my field.

MB

2019年6月9日

Excellent course with a wealth of information about tools and applications of whole genome sequencing. Presented in a very lucid and interesting manner, very crispy and simplified course.

フィルター:

Whole genome sequencing of bacterial genomes - tools and applications: 151 - 175 / 320 レビュー

by Jutimala P

2020年6月30日

indeed a very well explained course on bacterial genome sequencing

by Filippo S

2021年8月2日

practical, interesting, the final project/challenge was fantastic

by Neha G

2020年7月10日

Detailed course, learned to utilize various bioinformatics tools.

by Kotla S

2022年4月27日

Very designed and useful video and nice explanation by DTU staff

by Arthur d M P

2020年6月30日

in fact it was a really hard, but i am happy that i have done it

by Dr. S K

2020年5月19日

It is really a great experience, I have learnt a lot. Thank you

by Devina B

2020年1月15日

Great it was amazingly delivered and straightforward.

Thank you

by Rama V

2021年1月13日

Extremely good course on Whole Genome Sequence Analysis Tools

by Vedant G

2020年9月4日

Excellent course and gained very useful knowledge from tutors

by CHANCHALA A

2020年7月3日

Feeling happy to learn all these courses for my future scope

by Hassan

2019年6月12日

The Design, of course, is best as per researcher requirement.

by Suramya S

2022年7月18日

I thoroughly enjoyed this course and learned a lot as well.

by Adil M

2019年7月1日

It was highly informative and interesting. I enjoyed alot

by Sufiyan M

2021年7月27日

It was much informative and well prepared and conceptual

by Nagwan G E M

2020年8月27日

very useful and intersting course I finshed it in 4 days

by Sylvia D

2021年1月17日

very useful bioinformatics course with hand on training

by Marc B F

2018年5月2日

The tools provided are very interesting and easy to use

by 劉時詠[Alex]

2021年12月16日

p​refect class, with proper training for the students

by julio a a j

2018年3月15日

excelente curso me sirvió mucho para mi phD, gracias!

by Blanchard B

2022年5月8日

All I expected to learn by following this course.

by Toyin A A

2019年9月4日

Its quite interesting and technical. i enjoyed it

by Aneezay J

2022年7月17日

It is very brilliant experience in coursera.

by Mohamed H A E

2020年4月19日

I'm so happy for being one of your learners..

by Eloy H

2018年10月28日

It's a great course and it's not so difficult

by Dhanashree J A

2020年11月20日

Very well explained and interesting course.