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Whole genome sequencing of bacterial genomes - tools and applications に戻る

デンマーク工科大学(Technical University of Denmark(DTU)) による Whole genome sequencing of bacterial genomes - tools and applications の受講者のレビューおよびフィードバック

4.6
1,178件の評価

コースについて

This course will cover the topic of Whole genome sequencing (WGS) of bacterial genomes which is becoming more and more relevant for the medical sector. WGS technology and applications are high on international political agenda, as the classical methods are being replaced by WGS technology and therefore bioinformatic tools are extremely important for allowing the people working in this sector to be able to analyze the data and obtain results that can be interpreted and used for different purposes. The course will give the learners a basis to understand and be acquainted with WGS applications in surveillance of bacteria including species identification, typing and characterization of antimicrobial resistance and virulence traits as well as plasmid characterization. It will also give the opportunity to learners to learn about online tools and what they can be used for through demonstrations on how to use some of these tools and exercises to be solved by learners with use of freely available WGS analysis tools . By the end of this course you should be able to: 1. Describe the general Principles in typing of Bacteria 2. Give examples of the applications of Whole Genome Sequencing to Surveillance of bacterial pathogens and antimicrobial resistance 3. Apply genomic tools for sub-typing and surveillance 4. Define the concept of Next-Generation Sequencing and describe the sequencing data from NGS 5. Describe how to do de novo assembly from raw reads to contigs 6. Enumerate the methods behind the tools for species identification, MLST typing and resistance gene detection 7. Apply the tools for species identification, MLST typing and resistance gene detection in real cases of other bacterial and pathogen genomes. 8. Describe the methods behind the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing 9. Utilize the tools for Salmonella and E.coli typing, plasmid replicon detection and plasmid typing in real cases of other bacterial and pathogen genomes. 10. Explain the concept and be able to use the integrated bacterial analysis pipeline for batch analysis and typing of genomic data 11. Demonstrate how to construct phylogenetic tree based on SNPs 12. Apply the phylogenetic tool to construct phylogenetic trees and explain the relatedness of bacterial or pathogen strains 13. Describe how to create your own sequence database 14. Utilize the MyDbFinder tool to detect genetic markers of interest from whole genome sequencing...

人気のレビュー

AP

2020年7月19日

Thank you very much for this course through which i learnt basic handling of bioinformatics tools and concepts of WGS. This will help me a lot while pursuing my PhD research work in my field.

MB

2019年6月9日

Excellent course with a wealth of information about tools and applications of whole genome sequencing. Presented in a very lucid and interesting manner, very crispy and simplified course.

フィルター:

Whole genome sequencing of bacterial genomes - tools and applications: 101 - 125 / 319 レビュー

by Sarah A

2018年3月12日

one of the best courses ever i learned so many things in a short period. looking forward to your next course.

Thanks

by Van m

2020年10月31日

This cause helps me to understand how to analyze the whole genome sequence of bacteria. It is an excellent cause.

by Chuang W

2020年2月14日

a little bit difficult. but there are many practical experience and practical question in the lecture and test

by PC

2019年9月25日

A short but fun course to learn about the various tools and applications available for whole genome sequencing.

by Viviane G

2020年8月13日

I have enjoyed the learning process during this course! Its very good for biological interested professionals.

by Sanam P

2020年4月15日

Enjoyed this course. Now, I do have much idea in WGS. Thank you all the instructors for designing this course.

by Pratik K

2022年7月5日

Extremely informative! and hands on training helps a lot. I can apply this knowlwdge in my work. Thank you.

by Carlos H C

2017年11月19日

A clear and very didactic course on the tools that DTU offers to analyze genomes. Thanks for the classes!

by ALEXANDROS D

2019年6月26日

Very useful and helpful course to know how to interprete your results in different platforms and tools.

by Akampurira G

2022年7月26日

This is a great a way of learning a new skill, great tutors, great platform,flexible, this is amaizing

by devesh k

2022年7月21日

It was very informative and I have learnt to use the databases available for Whole Genome Sequencing.

by Nguyễn H T T

2021年8月3日

A very useful and practical course. Ms. Pimlapas Leekitcharoenphon's lectures are easy to understand.

by Parinda B

2020年6月18日

It was a great experience. I really enjoyed doing the course and hope tit will help me in the future

by Suprim T

2020年5月11日

Although I have 5 starred the course, a more practical approach could be incorporated in the course.

by Md. M A

2020年5月24日

Really excellent course. Must suggested for those who have interest in WGS(Whole Genome Sequencing)

by Kathya A O

2020年7月11日

Definitely gained a lot more than i expected! It was very helpful and I would really recommend it.

by Anushka J

2020年4月16日

the experience of learning this course was amazing. the faculties explained everything very well.

by MUTSHIENE D E

2019年3月29日

Great and very insightful course. It really shed light on many aspects on whole genome sequencing

by Josue D C C

2018年10月3日

Excelente curso, brinda una gran cantidad de herramientas muy útiles para realizar investigación.

by Asdren Z

2022年7月24日

Excellent. It helped me understand a lot of things related to Whole Genome Sequencing. Thank you

by Hamza A D

2018年11月9日

I like this course very much! The instructors were really helpful in getting their point across.

by Kerly R

2021年8月20日

Muchas gracias por su contenido valioso para realizar proyectos de investigación bioinformático

by Mohammed Y

2020年8月20日

This was an awesome exposure. I would like to learn more about metagenomics in the next course.

by Carlos A M V

2021年7月15日

A really great option to learn how to use web tools for genomic analysis. It is well explained